yybO [2019-06-12 11:11:10]

similar to permease

locus: BSU40570

pI: 9.81

mw: 48.09 kDa

protein length: 435 aa

gene length: 1308 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 4,170,045 4,171,352

The protein

Protein family

• [SW|major facilitator superfamily] (according to UniProt)
• Phthalate permease family (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|41AB19B291C766E55CA1C5BAEF157FD26B5D4297|yybO]
  description: [pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|26577401], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

Biological materials

Mutant

• MGNA-B839 (yybO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1838 NBRP B. subtilis, Japan]
• BKE40570 ([gene|41AB19B291C766E55CA1C5BAEF157FD26B5D4297|yybO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCATGATCTCCTGATA, downstream forward: _UP4_TAGAACATGAAAAAGAGAGC
• BKK40570 ([gene|41AB19B291C766E55CA1C5BAEF157FD26B5D4297|yybO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCATGATCTCCTGATA, downstream forward: _UP4_TAGAACATGAAAAAGAGAGC

References

• 26577401